ElasticBLAST is a new way to BLAST large numbers of queries, faster and on the cloud. Check out all the reasons you should use ElasticBLAST! #NCBIBLAST #CloudComputing 👉 ow.ly/oopl50KqJhh
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You can learn more about this project and other works completed at our Beyond Phylogenies codeathon here: github.com/topics/beyond-
👏 Thanks for sharing and for your hard work at the event! #OpenScience
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Had a good week participating in the NCBI Beyond Phylogenies codeathon. One of the things our team achieved was to add links between tools used for viral phylogenetics
You can now:
- load @nextstrain trees in Taxonium
- export out NS subtrees
- get clade stats with @GenSpectrum
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Updated #GeneReviews chapter on GLI3-related Pallister-Hall syndrome, characterized by anomalies ranging from polydactyly, asymptomatic bifid epiglottis, and hypothalamic hamartoma to laryngotracheal cleft with neonatal lethality: ow.ly/a4LU50KoCSV #rarediseases #genetics
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Updated #GeneReviews chapter on citrullinemia type I, a spectrum that includes a neonatal acute form, a milder late-onset form, a form in which symptoms begin at pregnancy or post partum, & a form without symptoms or hyperammonemia: ow.ly/UPyB50KoCRl #rarediseases #genetics
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Topics to follow
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New #GeneReviews Resource for Genetics Professionals detailing genetic disorders associated with founder variants common in the Bedouin population: ow.ly/7KzS50KoCP8 #rarediseases #genetics
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Newly released CDC #poliovirus genome sequence from a NY patient now available in #GenBank! ow.ly/7zKW50KohNa
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GenBank release 251.0 (8/15/2022) is now available on the NCBI FTP site. This release has 19.55 trillion bases and 2.94 billion records!
Read more 👉
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Learn more about the Diversity in #DataScience and #Informatics (DDSI) Internship, hosted by the NLM Intramural Research Program: nlm.nih.gov/research/DDSI.
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Meet the next generation of leaders advancing #DataScience & #Informatics at @NLM_NIH! Today's guest post by Dr. Virginia Meyer spotlights four interns from diverse backgrounds working w/ principal investigators across the NLM Intramural Research Program. nlmdirector.nlm.nih.gov/2022/08/17/mee
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NLM is one of the U.S. federal agencies responding to the #monkeypox public health emergency w/ scholarly publishing resources. We are working w/ publishers that submit to PubMed Central to make certain journal articles freely available, boosting access to research & results.
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Swift access to #monkeypox research & data is imperative to how we stop this outbreak & ultimately save lives. We are pleased to report that a number of scholarly publishers & organizations have taken actions to make monkeypox information more accessible. whitehouse.gov/ostp/news-upda
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Want to learn how to use NCBI's Foreign Contamination Screen? Join us for a short webinar September 7th! #SciEd #GenomeSequencing
👉 ow.ly/Lhi850Kliau
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Without more diverse genomic datasets, it will be difficult to ensure that all communities equally benefit from genomic medicine. For example, scientists find that genomic variants influencing common, complex diseases vary greatly in their frequency across different populations.
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Publication and sequence data from the recent zoonotic #henipavirus (#langya) outbreak now available from NCBI!
Publication: ow.ly/9VmI50Ki9Hx
Genome seqs: ow.ly/Aku550Ki9Iz
Gene seqs: ow.ly/4X0350Ki9Jl
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New links and annotations on Conserved Domain Search results (PubMed, Go Terms, EC numbers, SPARCLE Domain Architecture! ow.ly/3NwS50KgQ0C #NCBICGR
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Delighted to have completed this amazing NCBI workshop on Introduction to Pathogen Data fantastically facilitated by Dr. Rana Morris and @NCBI
I am enjoying developing my knowledge in computational biology and bioinformatics to help further my understanding of the field.
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Updated #GeneReviews chapter on epidermolysis bullosa simplex (EBS), characterized by fragility of the skin (and mucosal epithelia in some instances) that results in non-scarring blisters and erosions caused by minor mechanical trauma: ow.ly/VSwP50Keemv #rarediseases
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There are twenty-six new NCBI annotations in RefSeq for snow leopard, dingo (pictured), brown dog tick, malaria mosquito, rock ptarmigan, marmot, loggerhead turtle, and more: ow.ly/7Fwu50KeROQ #NCBICGR
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Sign up for the hands-on Petabyte Scale Sequence Search of SRA workshop with , Tom Madden , and when you register to attend our #JGI2022 Annual Meeting at usermeeting.jgi.doe.gov.
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Updated #GeneReviws chapter on thiamine-responsive megaloblastic anemia syndrome (TRMA), characterized by megaloblastic anemia, progressive sensorineural hearing loss, and diabetes mellitus: ow.ly/HjV350K8ASk #raredisease #genetics #health
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#NIH supports a coordinated approach to swiftly sharing #monkeypox research results including registering and reporting trial results in clinicaltrials.gov and submitting journal articles in PubMed Central.
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To accelerate efforts to mitigate the #Monkeypox outbreak, @WHOSTP coordinated with 19 allies and partners in calling on publishers to immediately allow access to relevant research and data. whitehouse.gov/ostp/news-upda
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Updated #GeneReviws chapter on MPPH syndrome, a developmental brain disorder characterized by megalencephaly (brain overgrowth) with the cortical malformation bilateral perisylvian polymicrogyria: ow.ly/GiaC50K8Afj #raredisease #genetics #health
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Updated #GeneReviews chapter on Kaufman oculocerebrofacial syndrome (KOS), which is characterized by developmental delay, severe intellectual disability, and distinctive craniofacial features: ow.ly/84l850K8zzz #raredisease #genetics #health
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We have added several exciting features to our tool iCn3D! Learn more here! 👇
ow.ly/EemA50K8Vf2
#AlphaFold #VR #AR #3DViz #StructuralBio
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New #GeneReviews chapter on GRIN2D-related developmental and epileptic encephalopathy (GRIN2D-related DEE), characterized by developmental delay or intellectual disability, epilepsy, and autism spectrum disorder among other features: ow.ly/JhAE50K8yZQ #raredisease #genetics
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NLM is pleased to invite all who are interested to the virtual Lindberg-King Lecture & Scientific Symposium, "Science, Society, and the Legacy of Donald A.B. Lindberg, M.D.," on Thurs, 9/1 at 9:00 a.m. ET. Register to attend:
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📣 The lab at NLM invites qualified applications for postdoctoral research positions in two areas:
• Bioinformatics/#DataScience: loom.ly/CRL4jwM
• #MachineLearning/Statistics: loom.ly/Ld-5q24
Positions open until filled.
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Announcing the #NCBIDatasets #SARSCoV2 taxonomy page to access genomes, proteins, information about SARS-CoV-2, and connections to related NCBI pages!
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Learn how to find, browse, and download NCBI genome data more easily than ever with NLM's #NCBIDatasets! Join us for a guided tour of our genome and taxonomy pages, and our all-new genome table: ow.ly/m1HW50K4xMb. #NCBICGR
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New #GeneReviews chapter on carnitine-acylcarnitine translocase (CACT) deficiency, which causes a defect in mitochondrial long-chain fatty acid β-oxidation, with variable clinical severity:
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NCBI's Nuala O’Leary, PhD, will demo Datasets TODAY at 10:20 AM CDT. Don't miss it! More information: ow.ly/24GJ50JQIlP #NCBICGR #UseGalaxy2022
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Join Nuala O’Leary, PhD, TODAY for her talk about Datasets, a new resource that makes it easier to access NCBI sequence data. Learn more: ow.ly/bHpg50JQHAy #NCBICGR #UseGalaxy2022
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